Publications

Publications

Indexed journals

Alicia Pérez, Aitziber Atutxa, Arantza Casillas, Koldo Gojenola, Álvaro Sellart (2018). Inferred joint multigram models for medical term normalization according to ICD. International Journal of Medical Informatics. Volume 110, February 2018 JCR Q1

Alicia Pérez, Rebecka Weegar, Arantza Casillas, Koldo Gojenola, Maite Oronoz, Hercules Dalianis (2017). Semi-supervised medical entity recognition: A study on Spanish and Swedish clinical corpora Journal of Biomedical Informatics, Volume 71, July 2017, Pages 16-30, ISSN 1532-0464, JCR Q1

Aitziber Atutxa, Alicia Pérez, Arantza Casillas (2017). Machine Learning approaches on Diagnostic Term Encoding with the ICD for Clinical Documentation. IEEE Journal of Biomedical and Health Informatics, issue 99. JCR Q1

Itziar Gonzalez-Dios, María Jesús Aranzabe, Arantza Díaz de Ilarraza (2018).The corpus of Basque simplified texts (CBST). Language Resources and Evaluation 52. pp. 217-247 JCR Q4

Arenas, C., Toma, C., Cormand, B., & Irigoien, I. (2017). Identifying Extreme Observations, Outliers and Noise in Clinical and Genetic Data. Current Bioinformatics, 12(2), 101-117. JCR Q4

Begoña Altuna, María Jesús Aranzabe, Arantza Díaz de Ilarraza (2017). EusHeidelTime: Time Expression Extraction and Normalisation for Basque. Procesamiento del Lenguaje Natural, 59, 15-22 ISSN: 1135-5948, ISSN electrónico: 1989-7553 BEST PAPER AWARD of the 33rd International Conference of the Spanish Society for Natural Language Processing (SEPLN2017) SJR Q3

Arantxa Otegi, Oier Imaz, Arantza Dı́az de Ilarraza, Mikel Iruskieta, Larraitz Uria (2017). ANALHITZA: a tool to extract linguistic information from large corpora in Humanities research. Procesamiento del Lenguaje Natural 58, pp. 77-84. ISSN: 1135-5948. SJR Q3

Itziar Aduriz, María Jesús Aranzabe, José María Arriola, Arantza Díaz de Ilarraza, Itziar Gonzalez-Dios, Ruben Urizar (2017). Building the Gold Standard for the Surface Syntax of Basque . Procesamiento del Lenguaje Natural, 58, 125-132. Consultado en ISSN (edición impresa): 1135-5948, ISSN (edición electrónica): 1989-7553. SJR Q3

Dombayci, C.; Farreres, J.; Rodriguez, H.; Espuña, A.; Graells, M. ​ (2017). Improving automation standards via semantic modelling: Application to ISA88. ISA transactions, vol. 67, pàgs. 443-454 ISSN: 0019-0578 Año: 2017 JCR-Science Edition (2015), Impacto: 2.6, Posición respecto del total de revistas: 6 / 56, Cuartil: Q1

Hermenegildo Fabregat, Lourdes Araujo, Juan Martinez-Romo.  Deep neural models for extracting entities and relationships in the new RDD corpus relating disabilities and rare diseases. Computer Methods and Programs in Biomedicine 164: 121-129 (2018). Indicios de calidad: (ISI Web of Science 2017) IP = 2.674, 19 de 103(Q1) (Computer Science, Theory and Practice)

Andres Duque Fernandez, Mark Stevenson, Juan Martinez-Romo, Lourdes Araujo. Co-occurrence graphs for word sense disambiguation in the biomedical domain. Artificial Intelligence in Medicine 87: 9-19 (2018). Indicios de calidad: (ISI Web of Science 2017) IP = 2.879, 31 de 132(Q1) (Computer Science, Artificial Intelligence)

Lourdes Araujo, Juan Martinez-Romo, Andres Duque Fernandez. Discovering taxonomies in Wikipedia by means of grammatical evolution. Soft Comput. 22(9): 2907-2919 (2018). Indicios de calidad: (ISI Web of Science 2017) IP = 2.367, 45 de 132(Q2) (Computer Science, Artificial Intelligence)

Agustín D. Delgado, Raquel Martínez, Soto Montalvo, Víctor Fresno. Person name disambiguation on the Web in a multilingual context. Information Sciences, vol. 465, pp. 373-387, 2018. Indicios de calidad: (ISI Web of Science 2017) IP = 4.038, 12 de 148 (Q1) (Computer Science Information Systems)

M. Almagro, R. Martínez, V. Fresno, S. Montalvo. Estudio preliminar de la anotación automática de códigos CIE-10 en informes de alta hospitalarios. Procesamiento del Lenguaje Natural. Vol. 60. 2017. ISSN: 1135-5948. SJR Q3

Latifi, M.; Rodríguez, H.; Sànchez-Marrè, M.​ (2017). ScoQAS : a semantic-based closed and open domain question answering system. Procesamiento de lenguaje natural, vol. 59, págs. 73-80, ISSN: 1135-5948, Año: 2017. SJR Q3

Other publications

Jiménez, A., Boto, F., Irigoien, I., Sierra, B., & Suarez, A. (2017). Stability analysis of radial turning process for Superalloys. Management Systems in Production Engineering, 25(3), 158-162.

Arenas, C., Irigoien, I., Mestres, F., Toma, C., & Cormand, B. (2017). Extreme Observations in Biomedical Data. In Extended Abstracts Fall 2015 (pp. 3-8). Birkhäuser, Cham.

Itziar Aduriz, Iñaki Alegria, Olatz Arregi, Arantza Diaz de Ilarraza, Kepa Sarasola (2017) . Hizkuntza-teknologia “Datu Handien” garaian: programa bilatzaileak, itzultzaileak… Senez, 48 (2017)

Izaskun Aldezabal, Mª Jesus Aranzabe, Arantza Diaz de Ilarraza, Igone Zabala (2017). Terminologia lantzeko baliabideak EHUn. Senez 48 (2017), 211-216. ISSN: 1132-2152

Itziar Gonzalez-Dios, María Jesús Aranzabe, Arantza Díaz de Ilarraza (2017). Euskarazko testu idatzien konplexutasunaren azterketa eta sinplifikazio automatikorako proposamena. EKAIA. Hurrengo argitalpenak. DOI: 10.1387/ekaia.17907

Uxoa Iñurrieta, Itziar Aduriz, Arantza Díaz de Ilarraza, Gorka Labaka, Kepa Sarasola (2017). Rule-based translation of Spanish verb-noun combinations into Basque. Proceedings of the 13th Workshop on Multiword Expressions MWE 2017 (EACL2017), pages 149–154,Valencia, Spain, April 4. ©2017 Association for Computational Linguistics

Begoña Altuna, María Jesús Aranzabe&Arantza Díaz de Ilarraza (2018). An Event Factuality Annotation Proposal for Basque. Proceedings of the Second Workshop on Corpus-Based Research in the Humanities (CRH-2)

Jon Alkorta, Koldo Gojenola, Mikel Iruskieta, Maite Taboada (2017). Using lexical level information in discourse structures for Basque sentiment analysis.Proceedings of the 6th Workshop on Recent Advances in RST and Related Formalisms, pages 39–47, Santiago de Compostela, Spain, September 4 2017. Association for Computational Linguistics

Uxoa Iñurrieta, Itziar Aduriz, Arantza Díaz de Ilarraza, Gorka Labaka, Kepa Sarasola (2017) Aditza+izena konbinazioen itzulpen automatikoa, arau linguistikoen bidez. IkerGazte: nazioarteko ikerketa euskaraz. Kongresuko artikulu-bilduma. Giza zientziak eta artea.

Begoña Altuna, María Jesús Aranzabe, Arantza Díaz de Ilarraza (2017). Euskarazko ezeztapenaren tratamendu automatikorako azterketa. Iñaki Alegria, Ainhoa Latatu, Miren Josu Ormaetxebarria eta Patxi Salaberri (arg.), II. IkerGazte, Nazioarteko Ikerketa Euskaraz: Giza Zientziak eta Artea, 127-134, Udako Euskal Unibertsitatea (UEU), Bilbo

S. Santiso, A. Casillas, A. Pérez, M. Oronoz (2017). Medical Entity Recognition and Negation Extraction: Assessment of NegEx on Health Records in Spanish. Bioinformatics and Biomedical Engineering. 5th International Work-Conference, IWBBIO 2017, Granada, Spain, April 26–28, 2017, Proceedings, Part I. DOI: 10.1007/978-3-319-56148-6 . Part of the Lecture Notes in Computer Science book series (LNCS, volume 10208).

A. Soraluze, O. Arregi, X. Arregi,A. Diaz de Ilarraza (2017). Enriching Basque Coreference Resolution System using Semantic Knowledge sources. Proceedings of the 2nd Workshop on Coreference Resolution Beyond OntoNotes (CORBON 2017), co-located with EACL 2017, pp. 8-16, Valencia, Spain.

Haritz Salaberri, Olatz Arregi, Beñat Zapirain (2017). Euskarazko gertaeren etiketatze automatikoa. IkerGazte-2017, Iruñea (Nafarroa)

Ageno, A.; Casillas, A.; Martínez, R.; Pérez, A.; Rodríguez, H.; Turmo,​ J. (2017). Preliminary experiments on the use of NegEx with syntax for negation detection in Spanish Electronic Health Records. Taller de NEGación en ESpañol, NEGES-2017: 19 de septiembre de 2017. Sociedad Española para el Procesamiento del Lenguaje Natural (SEPLN). 2017.

Montalvo, S.; Oronoz, M.; Rodriguez, H.; Martínez, R. ​ (2017). Biomedical abbreviation recognition and resolution by PROSA-MED. Proceedings of the Second Workshop on Evaluation of Human Language Technologies for Iberian Languages (IberEval 2017) co-located with 33th Conference of the Spanish Society for Natural Language Processing (SEPLN 2017): Murcia, Spain, September 19, 2017. CEUR-WS.org.

Marimon, M.; Padró, L.; Turmo, J.​ (2018). Coreference Resolution in FreeLing 4.0. Proceedings of the Eleventh International Conference on Language Resources and Evaluation. (LREC 2018), May 7-12, 2018, Miyazaki, Japan. European Language Resources Association (ELRA)

Medina, S.; Turmo, J.; Loharja, H.;Padró, L . (2018). Semi-supervised Learning for Disabilities Detection on English and Spanish Biomedical Text. Proceedings of the Evaluation of Human Language Technologies for Iberian Languages. Workshop (IberEval 2018)

Álvarez, P.; Padró, L. (2018). Basic CRF Approach to DIANN 2018 Shared Task. Proceedings of the Evaluation of Human Language Technologies for Iberian Languages. Workshop (IberEval 2018).

Loharja, H.; Padró, L.; Turmo, J. (2018). Negation Cues Detection Using CRF on Spanish Product Review Texts. a presentar en Taller de NEGación en ESpañol, NEGES-2018: 19 de septiembre de 2018, Sevilla. Sociedad Española para el Procesamiento del Lenguaje Natural (SEPLN).

Medina, S; Turmo J​ . (2018). Building a Spanish/Catalan Health Records Corpus with Very Sparse Protected Information Labelled. Proceedings of the Eleventh International Conference on Language Resources and Evaluation (LREC 2018), May 7-12, 2018, Miyazaki, Japan. European Language Resources Association (ELRA).

Cotik, V.; Rodríguez, H.; Vivaldi, J. (2018). Spanish Named Entity Recognition in the Biomedical Domain. Proceedings of SIMBig 2018.

Cotik, V.; Rodríguez, H.; Vivaldi, J. ​ (2017). Arabic medical entity tagging using distant learning in a multilingual framework. Journal of King Saud University-Computer and Information Sciences, vol. 29, núm. 2, págs. 204-211,ISSN: 1319-1578 Año: 2017

Vivaldi, J.; Rodríguez, H.​ (2017). Arabic medical terms compilation from Wikipedia. 3rd International IEEE Colloquium on Information Science and Technology Tetuan-Chefchaouen, Morocco. Institute of Electrical and Electronics Engineers (IEEE).

Olivares, A.; Stankovic, I.; González, H.; Rodríguez, H. ​ (2018). Measuring distances between medical entities. Step 1: DrugBank. Proceedings of the Conference of the Catalan Association for Artificial Intelligence 2018. Girona, España.

Medina, S.; Turmo, J. ​ (2018). Joint classification of Key-Phrases and Relations in Electronic Health Documents. Proceedings of TASS workshop of SELPN. 2018. Sevilla España.

Vivaldi, J.; Rodríguez, H. ​ (2018). TASS2018: Medical knowledge discovery by combining terminology extraction techniques with machine learning classification. Proceedings of TASS workshop of SEPLN. 2018.
Sevilla España

Sànchez-Ferreres, J.; Carmona, J.; Padró, L.​ (2017). Aligning Textual and Graphical Descriptions of Processes Through ILP Techniques. CAISE 2017: Advanced Information Systems Engineering, 413--427
Springer International Publishing.

El Adlouni, Y.; Lahbari, I.; Rodríguez, H.; Meknassi, M.; El Alaoui, S.O.; Ennahnahi, N.​ UPC-USMBA at SemEval-2017 Task 3: Combining multiple approaches for CQA for Arabic. 11th International Workshop on Semantic Evaluations (SemEval-2017): proceedings of the workshop: August 3-4, 2017, Vancouver, Canada. Association for Computational Linguistics. 2017.

Lahbari, I.; Rodríguez, H.; El Alaoui, S.O. ​ (2018). Not all the questions are (equally) difficult. An hybrid approach to CQA in Arabic. Procesamiento del Lenguaje Natural. N. 60 (2018).

A. Díaz de Ilarraza, K. Gojenola, R. Martínez, V. Fresno, J. Turmo, L. Padró. PROcesamiento Semántico textual Avanzado para la detección de diagnósticos, procedimientos, otros conceptos y sus relaciones en informes MEDicos (PROSA-MED). Procesamiento del Lenguaje Natural. Vol. 59, pp. 133-136. 2017. ISSN: 1135-5948.

S. Montalvo, M. Oronoz, H. Rodríguez, R. Martínez. Biomedical abbreviation recognition and resolution by PROSAMED. Proceedings of the Second Workshop on Evaluation of Human Language Technologies for Iberian Languages (IberEval 2017). CEUR Workshop Proceedings, 1881, pp. 247--254. Murcia (España).

Soto Montalvo, Raquel Martínez, Mario Almagro, Susana Lorenzo. MAMTRA-MED at Biomedical Abbreviation Recognition and Resolution. Proceedings of the 3rd Workshop on Evaluation of Human Language Technologies for Iberian Languages (IberEval 2018), pp. 290-296. Sevilla, España.

S. Montalvo, R. Martínez, V. Fresno, A.D. Delgado, A. Zubiaga, R. Berendsen. Overview of the M-WePNaD task: Multilingual web person name disambiguation at IberEval 2017. Proceedings of the Second Workshop on Evaluation of Human Language Technologies for Iberian Languages (IberEval 2017). CEUR Workshop Proceedings Vol. 1881, pp. 113-127. Murcia (España).

Mario Almagro, Soto Montalvo, Arantza Díaz de Ilarraza, Alicia Pérez. MAMTRA-MED at CLEF eHealth 2018: A Combination of Information Retrieval Techniques and Neural Networks for ICD-10 Coding of Death Certificates. Working Notes of CLEF 2018 - Conference and Labs of the Evaluation Forum. CEUR Workshop Proceedings Vol. 2125. Avignon, Francia.

Andrés Duque Fernandez, Lourdes Araujo, Juan Martinez-Romo. LSI UNED at M-WePNaD: Embeddings for Person Name Disambiguation. IberEval@SEPLN 2017: 138-146. Murcia (España).

Hermenegildo Fabregat, Juan Martinez-Romo, Lourdes Araujo. Overview of the DIANN Task: Disability Annotation Task. IberEval@SEPLN 2018: 1-14.

Hermenegildo Fabregat, Juan Martinez-Romo, Lourdes Araujo. UNED at DIANN 2018: Unsupervised System for Automatic Disabilities Labeling in Medical Scientific Documents. IberEval@SEPLN 2018: 53-60. Sevilla, España.

Hermenegildo Fabregat, Juan Martinez-Romo, Lourdes Araujo. Aplicación basada en Deep Learning para identificación de claves de negación en castellano. Neges 2018: Workshop on negation in Spanish (SEPLN 2018). Sevilla, España.

Aitziber Atutxa, Arantza Casillas, Nerea Ezeiza, Victor Fresno, Iakes Goenaga, Koldo Gojenola, Raquel Martínez, Maite Oronoz Anchordoqui, Olatz Perez-De-Viñaspre. IxaMed at CLEF eHealth 2018 Task 1: ICD10 Coding with a Sequence-to-Sequence Approach. Working Notes of CLEF. 2018 - Conference and Labs of the Evaluation Forum. CEUR Workshop Proceedings Vol. 2125.
Avignon, Francia.

Book chapters

Antton Gurrutxaga, Iñaki Alegria, Xabier Artola (2018). Caracterización computacional de la idiomaticidad: aplicación a la combinación nombre+verbo en euskera. Estudios de Lexicología y Lexicografía. Homenaje a Eloína Miyares Bermúdez (book chapter)

Phd Theses

Author: Iakes Goenaga Azkarate

Supervisor: Nerea Ezeiza, Koldo Gojenola

Title: ASKHi: Analisi sintaktiko konputazional hibridoa paradigma desberdinen konbinazioan oinarrituta

Institution: Universidad del País Vasco UPV/EHU

Date: 2017

Author: Ander Soraluze

Supervisor: Olatz Arregi Uriarte, Xabier Arregi Iparragirre

Title: Korreferentzia-ebazpena euskarazko testuetan

Institution: Universidad del País Vasco UPV/EHU

Date: 2017

Author: Zuhaitz Beloki

Supervisor: Xabier Artola, Aitor Soroa

Title: Integrazioa hizkuntzaren prozesamenduan. Anotazio-eskemak eta elkarreragingarritasuna. Testuen prozesatze masiboa, datu handien teknikak erabiliz

Institution: Universidad del País Vasco UPV/EHU

Date: 2017

Author: Sara Santiso

Supervisor: Arantza Casillas, Alicia Pérez

Title: Detección de efectos adversos a medicamentos en textos clínicos en castellano

Institution: Universidad del País Vasco UPV/EHU

Estimated date: 2018

Author: Jon Alkorta

Supervisor: Mikel Iruskieta, Koldo Gojenola

Title: Influencia de la estructura discursiva en análisis de opiniones / Diskurtso-egituren eragina iritzi-testuetan

Institution: Universidad del País Vasco UPV/EHU

Estimated date: 2019

Author: Andrés Duque Fernández
Supervisor: Lourdes Araujo Serna y Juan Martínez Romo
Title: Word Sense Disambiguation in Multilingual Contexts
Institution: Nacional de Educación a Distancia (UNED)
Date: 17-02-2017

Author: Agustín Delgado Leal
Supervisor: Raquel Martínez Unanue y Ma. Soto Montalvo Harranz.
Title: Desambiguación de nombres de personas en la Web en un contexto multilingüe
Institution:Nacional de Educación a Distancia (UNED)
Date: 13-09-2017