INDEXED JOURNALS

Hermenegildo Fabregat, Andrés Duque, Juan Martínez-Romo, Lourdes Araujo:
Negation-based transfer learning for improving biomedical Named Entity Recognition and Relation Extraction. J. Biomed. Informatics 138: 104279 (2023)

Alejandro Sánchez-de-Castro-Fernández, Lourdes Araujo, Juan Martínez-Romo:
RoBERTime: A novel model for the detection of temporal expressions in Spanish. Proces. del Leng. Natural 70: 39-51 (2023)

Villaplana, A.; Martínez, R.; Montalvo, S. Improving Medical Entity Recognition in Spanish by Means of Biomedical Language Models. Electronics 2023, 12, 4872. Special Issue Natural Language Processing and Information Retrieval, 2nd Edition https://doi.org/10.3390/electronics12234872

Ricardo Sánchez-de-Madariaga, Juan Martínez-Romo, José Miguel Cantero Escribano, Lourdes Araujo:
Semi-supervised incremental learning with few examples for discovering medical association rules. BMC Medical Informatics Decis. Mak. 22(1): 20 (2022)

Andrés Duque, Hermenegildo Fabregat, Lourdes Araujo, Juan Martínez-Romo:
A keyphrase-based approach for interpretable ICD-10 code classification of Spanish medical reports. Artif. Intell. Medicine 121: 102177 (2021)

Hermenegildo Fabregat., Juan Martínez-Romo, Lourdes Araujo:
Understanding and Improving Disability Identification in Medical Documents. IEEE Access 8: 155399-155408 (2020)

Alberto Blanco, Alicia Pérez, Arantza Casillas, Daniel Cobos.
Extracting Cause of Death from Verbal Autopsy with Deep Learning interpretable methods. IEEE Journal of Biomedical and Health Informatics, (2020)

Alberto Blanco, Alicia Pérez, Arantza Casillas.
Extreme multi-label ICD classification: sensitivity to hospital service and time. IEEE Access 8: 183534-183545 (2020).

Sara Santiso , Alicia Pérez, Arantza Casillas.
Adverse Drug Reaction extraction: Tolerance to entity recognition errors and sub-domain variants. Computer Methods and Programs in Biomedicine 119 (2021)

Mario Almagro, Raquel Martínez, Víctor Fresno, Soto Montalvo:
ICD-10 Coding of Spanish Electronic Discharge Summaries: An Extreme Classification Problem. IEEE Access 8: 100073-100083 (2020)

CONFERENCES & WORKSHOPS

Hermenegildo Fabregat, Andrés Duque, Lourdes Araujo, Juan Martínez-Romo:
A Re-labeling Approach Based on Approximate Nearest Neighbors for Identifying Gambling Disorders in Social Media. CLEF 2023: 174-185.

Juan R. Martinez-Rico, Lourdes Araujo, Juan Martínez-Romo: NLPIR-UNED at CheckThat!-2023: Ensemble of Classifiers for Check-Worthiness Estimation. CLEF (Working Notes) 2023: 372-382.

Hermenegildo Fabregat, Andrés Duque, Lourdes Araujo, Juan Martínez-Romo:
NLP-UNED-2 at eRisk 2023: Detecting Pathological Gambling in Social Media through Dataset Relabeling and Neural Networks. CLEF (Working Notes) 2023: 672-683.

Juan Martínez-Romo, Lourdes Araujo, Xabier Larrayoz, Maite Oronoz, Alicia Pérez:
OBSER-MENH at eRisk 2023: Deep Learning-Based Approaches for Symptom Detection in Depression and Early Identification of Pathological Gambling Indicators. CLEF (Working Notes) 2023: 706-717.

Andrés Duque, Lourdes Araujo, Juan Martínez-Romo, Hermenegildo Fabregat:
LSI_UNED at ClinAIS 2023: Transformer Models for Section Identification in Spanish Medical Reports. IberLEF@SEPLN 2023.

Hermenegildo Fabregat, Andrés Duque, Lourdes Araujo, Juan Martínez-Romo:
NLP-UNED at MentalRiskES 2023: Approximate Nearest Neighbors for Identifying Health Disorders. IberLEF@SEPLN 2023.

Alicia Pérez, Maite Oronoz, Juan Martínez-Romo, Lourdes Araujo:
OBSER-MENH: Digital OBSERvatory of MENtal Health in Social Networks for Healthcare Institutions Based on Language Technologies. SEPLN (Projects and Demonstrations) 2023: 1-4

Alejandro Fuster-Baggetto and Víctor Fresno. Is Anisotropy Really the Cause of BERT Embeddings not Being Semantic?  Findings of the Association for Computational Linguistics: EMNLP 2022, Virtual Event / Abu Dhabi, 7-11 December, 2022. Association for Computational Linguistics 2022.

Juan Martínez-Romo, Lourdes Araujo, Blanca Reneses, Julia Sevilla-Llewellyn-Jones, Ignacio Martínez-Capella, Germán Seara-Aguilar: Detección de Indicios de Autolesiones No Suicidas en Informes Médicos de Psiquiatría Mediante el Análisis del Lenguaje. Proces. del Leng. Natural 69: 129-140 (2022).

Juan R. Martinez-Rico, Juan Martínez-Romo, Lourdes Araujo: NLPIR-UNED at CheckThat!-2022: Ensemble of Classifiers for Fake News Detection. CLEF (Working Notes) 2022: 595-605.

Elena Campillo Ageitos, Juan Martínez-Romo, Lourdes Araujo: UNED-MED at eRisk 2022: depression detection with TF-IDF, linguistic features and Embeddings. CLEF (Working Notes) 2022: 864-874.

Hermenegildo Fabregat, Andrés Duque, Lourdes Araujo, Juan Martínez-Romo:
UNED-NLP at eRisk 2022: Analyzing gambling disorders in Social Media using Approximate Nearest Neighbors. CLEF (Working Notes) 2022: 894-904

Gildo Fabregat Ander Cejudo Juan Martinez-Romo Alicia Pérez Lourdes Araujo Nuria Lebeña Maite Oronoz Arantza Casillas Approximate Nearest Neighbour Extraction Techniques and Neural Networks for Suicide Risk Prediction in the CLPsych 2022 Shared Task. Proceedings of the Eighth Workshop on Computational Linguistics and Clinical Psychology. 2022.

Itxaso Alayo, Ander Merketegi, Maite Oronoz, Arantza Casillas, Alicia Pérez, Olatz Garin, Isabel Moreira, Montse Ferrer, Jordi Alonso, Yolanda Pardo A baseline model for the automation of the systematic review of Patient-Reported Outcomes measures: the case of the BiblioPRO virtual library Jornada científica CIBERESP 2022 (https://jornadacientifica.ciberesp.es/). Centro de Investigación Biomédica en Red, Epidemiología y Salud Pública. 2022

Víctor Fresno y Enrique Amigó. Plataforma de exploración de la Composición Semántica a partir de Modelos de Lenguaje pre-entrenados y embeddings estáticos. Adrián Ghajari,
Congreso de la Sociedad Española para el Procesamiento del Lenguaje Natural. 2022.

Sergio Santana, Alicia Pérez, Arantza Casillas, Maite Oronoz Erlazio-erauzketa testu klinikoetan hizkuntzaren prozesamenduaren bidez IV. IKERGAZTE NAZIOARTEKO IKERKETA EUSKARAZ. UEU, 2021

Ander Cejudo, Owen Trigueros, Alicia Pérez, Arantza Casillas, Daniel Cobos  Verbal Autopsy: First Steps Towards Questionnaire Reduction Ekštein K., Pártl F., Konopík M. Text, Speech, and Dialogue. TSD 2021. Lecture Notes in Computer Science, vol 12848. Springer, Cham.

Alberto Blanco, Sonja Remmer, Alicia Pérez, Hercules Dalianis, Arantza Casillas On the Contribution of Per-ICD Attention Mechanisms to Classify Health Records in Languages With Fewer Resources than English Proceedings of the International Conference on Recent Advances in Natural Language Processing, RANLP 2021, Varna, Bulgaria, September 1-3, 2021. Deep Learning for Natural Language Processing Methods and Applications.

Lourdes Araujo, Juan Martínez-Romo, Jordi Turmo, Lluís Padró, Arantza Casillas, Koldo Gojenola:
DOTT-HEALTH: Desarrollo de Tecnologı'a aplicada a textos para el soporte de diagnosis, prevención y gestión de instituciones de SALUD. SEPLN (Projects and Demonstrations) 2021: 13-16

Juan R. Martinez-Rico, Juan Martínez-Romo, Lourdes Araujo:
NLP&IR@UNED at CheckThat! 2021: Check-worthiness estimation and fake news detection using transformer models. CLEF (Working Notes) 2021: 545-557

Hermenegildo Fabregat, Andrés Duque, Lourdes Araujo, Juan Martínez-Romo:
LSI_UNED at CLEF eHealth2021: Exploring the effects of transfer learning in negation detection and entity recognition in clinical texts. CLEF (Working Notes) 2021: 780-793

Elena Campillo Ageitos, Hermenegildo Fabregat, Lourdes Araujo, Juan Martínez-Romo:
NLP-UNED at eRisk 2021: self-harm early risk detection with TF-IDF and linguistic features. CLEF (Working Notes) 2021: 950-965

Elena Campillo Ageitos, Juan Martínez-Romo, Lourdes Araujo.
NLP-UNED at eRisk 2020: Self-harm Early Risk Detection with Sentiment Analysis and Linguistic Features. CLEF 2020

Juan R. Martinez-Rico, Lourdes Araujo, Juan Martínez-Romo.
NLP&IR@UNED at CheckThat! 2020: A Preliminary Approach for Check-Worthiness and Claim Retrieval Tasks using Neural Networks and Graphs. CLEF 2020

Alberto Blanco, Alicia Pérez, Arantza Casillas.
Automatic Classification of Medical Records with Multi-label Classifiers and Similarity Match Coders. CEUR Workshop Proceedings, Vol 2696 - Working Notes of CLEF 2020 - Conference and Labs of the Evaluation Forum

Santana, S and Pérez, A and Casillas, A.
HapLap at eHealth-KD Challenge 2020. Proceedings of the Iberian Languages Evaluation Forum co-located with 36th Conference of the Spanish Society for Natural Language Processing, IberLEF@ SEPLN 2020

Medina, S. and Turmo, J.
Everything transformers: Recognition, classification and normalisation of professions and family relations. Proceedings of the Iberian Languages Evaluation Forum co-located with 36th Conference of the Spanish Society for Natural Language Processing, IberLEF@ SEPLN 2020

DEGREE, MASTER, & PHD THESES

AUTOMATIC CATEGORIZATION OF ELECTRONIC HEALTH RECORDS Mario Almagro Cádiz

Hermenegildo Fabregat Marcos: Biomedical Information Extraction: Exploring new entities and relationships PHD. Thesis. Septiembre 2021 (UNED)

Mario Almagro Cádiz: Automatic Categorization of Electronic Health Records PHD. Thesis Diciembre 2021

Popa, M.E.
Automatic mapping of mentions of symptoms and complaints in clinical reports to ICPC-2. Degree Thesis. June 2021

Losada, D.
Identificación de referentes de entidades médicas ya conocidas en informes clínicos. Degree Thesis. June 2021

Terral, M.
Codificación automática de entidades médicas en informes clínicos. Degree Thesis. April 2021

Merino, M.A.
Machine Learning per al reconeixement i classificació d'entitats mèdiques en informes clínics. Degree Thesis. April 2020